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Raw Signal Density Graphs of CD4+ CD25- CD45RA+ Naive Primary Cells Histone H3K27ac ChIP-Seq Data
Illumina Histone H3K27ac ChIP-Seq read mappings from CD4+ CD25- CD45RA+ Naive Primary Cells, Donor Donor 62, were processed into density graphs of raw signal representing the aligned read density.


Project News:
2011/12/19:
ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded



alias: DNA_Lib 730-DNA_Lib 730-DNA_Lib 730-DNA_Lib 730.hg19.level.2.release.5
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27ac.Donor_62.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 5
BROWSER_TRACK_NAME: CCCN H3K27ac 62 30
BROWSER_TRACK_DESCRIPTION: BI CD4+ CD25- CD45RA+ Naive Primary Cells Histone H3K27ac Donor 62 Library DNA_Lib 730 EA Release 5
NUMBER_OF_MAPPED_READS: 13,051,302
NUMBER_OF_H3K27ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 34
FINDPEAKS_SCORE: 0.5702
FINDPEAKS_PERCENTILE: 100
HOTSPOT_SCORE: 0.577
HOTSPOT_PERCENTILE: 100
IROC_SCORE: 0.9953
IROC_PERCENTILE: 68
POISSON_SCORE: 0.6134
POISSON_PERCENTILE: 100
MAXIMUM_REPLICATE_CORRELATION: NA

 

 


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