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Raw Signal Density Graphs of iPS-20b Cell Line Histone H3K9ac ChIP-Seq Data
Illumina Histone H3K9ac ChIP-Seq read mappings from the iPS-20b Cell Line, Library DNA_Lib 352, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/12/19: ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: DNA_Lib 352-DNA_Lib 352-DNA_Lib 352-DNA_Lib 352.hg19.level.2.release.5
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: BI.iPS-20b.H3K9ac.DNA_Lib_352.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 5 BROWSER_TRACK_NAME: iPS20b H3K9ac 52 BROWSER_TRACK_DESCRIPTION: BI iPS-20b Cell Line Histone H3K9ac Library DNA_Lib 352 EA Release 5 NUMBER_OF_MAPPED_READS: 38,566,562 NUMBER_OF_H3K9ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 19 FINDPEAKS_SCORE: 0.2214 FINDPEAKS_PERCENTILE: 74 HOTSPOT_SCORE: 0.2641 HOTSPOT_PERCENTILE: 68 IROC_SCORE: 0.9968 IROC_PERCENTILE: 74 POISSON_SCORE: 0.3297 POISSON_PERCENTILE: 74 MAXIMUM_REPLICATE_CORRELATION: 0.81 |
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