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Raw Signal Density Graphs of Fetal Thymus Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Thymus, Donor H-23964, Library DS17876 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/11/3:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release5.xml' uploaded
alias: DS17876.hg19.level.2.release.5
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Thymus.ChromatinAccessibility.H-23964.DS17876.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 5
BROWSER_TRACK_NAME: FT DNase 64 76
BROWSER_TRACK_DESCRIPTION: UW Fetal Thymus DNase Hypersensitivity Donor H-23964 Library DS17876 EA Release 5
NUMBER_OF_MAPPED_READS: 78,106,015
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 47
FINDPEAKS_SCORE: 0.3354
FINDPEAKS_PERCENTILE: 21
HOTSPOT_SCORE: 0.3208
HOTSPOT_PERCENTILE: 19
IROC_SCORE: 0.9965
IROC_PERCENTILE: 85
POISSON_SCORE: 0.3607
POISSON_PERCENTILE: 13
MAXIMUM_REPLICATE_CORRELATION: 0.99
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Thymus.ChromatinAccessibility.H-23964.DS17876.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 5
BROWSER_TRACK_NAME: FT DNase 64 76
BROWSER_TRACK_DESCRIPTION: UW Fetal Thymus DNase Hypersensitivity Donor H-23964 Library DS17876 EA Release 5
NUMBER_OF_MAPPED_READS: 78,106,015
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 47
FINDPEAKS_SCORE: 0.3354
FINDPEAKS_PERCENTILE: 21
HOTSPOT_SCORE: 0.3208
HOTSPOT_PERCENTILE: 19
IROC_SCORE: 0.9965
IROC_PERCENTILE: 85
POISSON_SCORE: 0.3607
POISSON_PERCENTILE: 13
MAXIMUM_REPLICATE_CORRELATION: 0.99
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