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Raw Signal Density Graphs of Fetal Renal Pelvis Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Renal Pelvis, Donor H-23914, Library DS17760 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/11/3:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release5.xml' uploaded
alias: DS17760.hg19.level.2.release.5
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Renal_Pelvis.ChromatinAccessibility.H-23914.DS17760.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 5
BROWSER_TRACK_NAME: FRP DNase 14 60
BROWSER_TRACK_DESCRIPTION: UW Fetal Renal Pelvis DNase Hypersensitivity Donor H-23914 Library DS17760 EA Release 5
NUMBER_OF_MAPPED_READS: 38,704,326
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 47
FINDPEAKS_SCORE: 0.4329
FINDPEAKS_PERCENTILE: 51
HOTSPOT_SCORE: 0.4305
HOTSPOT_PERCENTILE: 51
IROC_SCORE: 0.9881
IROC_PERCENTILE: 9
POISSON_SCORE: 0.4812
POISSON_PERCENTILE: 49
MAXIMUM_REPLICATE_CORRELATION: 0.92
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Renal_Pelvis.ChromatinAccessibility.H-23914.DS17760.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 5
BROWSER_TRACK_NAME: FRP DNase 14 60
BROWSER_TRACK_DESCRIPTION: UW Fetal Renal Pelvis DNase Hypersensitivity Donor H-23914 Library DS17760 EA Release 5
NUMBER_OF_MAPPED_READS: 38,704,326
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 47
FINDPEAKS_SCORE: 0.4329
FINDPEAKS_PERCENTILE: 51
HOTSPOT_SCORE: 0.4305
HOTSPOT_PERCENTILE: 51
IROC_SCORE: 0.9881
IROC_PERCENTILE: 9
POISSON_SCORE: 0.4812
POISSON_PERCENTILE: 49
MAXIMUM_REPLICATE_CORRELATION: 0.92
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