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ChIP-Seq analysis ofH3K4me1 in human H1 cells
Human Chromatin IP REMC Sequencing on Illumina
Project News:
2009/6/22: EXPERIMENT XML file 'BI.experiment.314G6AAXX.7.H1.H3K4me1.xml' uploaded
alias: 314G6AAXX090406-7-S
expected_number_runs: 1 expected_number_spots: 10000000 expected_number_reads: 10000000 center_name: BI STUDY_REF: G1828 SAMPLE_DESCRIPTOR: 31731.0 LIBRARY LIBRARY_NAME: Solexa-10529 LIBRARY_STRATEGY: ChIP-Seq LIBRARY_SOURCE: GENOMIC LIBRARY_SELECTION: ChIP LIBRARY_LAYOUT: SINGLE LIBRARY_CONSTRUCTION_PROTOCOL: Single read - Illumina SPOT SPOT_DECODE_METHOD: 1 PLATFORM ILLUMINA INSTRUMENT_MODEL: Illumina Genome Analyzer II CYCLE_SEQUENCE: CYCLE_COUNT: 51 BASE CALLS SEQUENCE_SPACE: Base Space BASE_CALLER: Solexa primary analysis QUALITY SCORES Quality Type: other QUALITY_SCORER: Solexa primary analysis NUMBER_OF_LEVELS: 80 MULTIPLIER: 1.0 ATTRIBUTES EXPERIMENT_TYPE: Histone H3K4me1 EXTRACTION_PROTOCOL: SDS lysis EXTRACTION_PROTOCOL_TYPE_OF_SONICATOR: Bioruptor EXTRACTION_PROTOCOL_SONICATION_CYCLES: 1 CHIP_PROTOCOL: standard CHIP_PROTOCOL_CHROMATIN_AMOUNT: standard CHIP_PROTOCOL_BEAD_TYPE: standard CHIP_PROTOCOL_BEAD_AMOUNT: standard CHIP_PROTOCOL_ANTIBODY_AMOUNT: standard CHIP_ANTIBODY: H3K4Me1 CHIP_ANTIBODY_PROVIDER: Abcam CHIP_ANTIBODY_CATALOG: ab8895 CHIP_ANTIBODY_LOT: 383111 |
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